STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
UFO1_3203Cof-like hydrolase; KEGG: hypothetical protein; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3. (272 aa)    
Predicted Functional Partners:
UFO1_3202
KEGG: oligopeptidase F; TIGRFAM: oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F, Oligopeptidase F.
  
    0.527
UFO1_3204
KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF1341; PFAM: protein of unknown function DUF1341.
       0.478
UFO1_3205
KEGG: SelA-related pyridoxal phosphate-dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: Pyridoxal phosphate-dependent transferase.
       0.478
UFO1_3206
KEGG: inner membrane protein; TIGRFAM: Protein of unknown function DUF4310; PFAM: Protein of unknown function DUF4310.
       0.414
UFO1_3207
KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03580; PFAM: Conserved hypothetical protein CHP03580.
       0.414
UFO1_3212
Transcriptional antiterminator, BglG; KEGG: hypothetical protein; PFAM: PRD domain protein.
  
  
 0.403
UFO1_3177
TIGRFAM: PTS system, glucose-specific IIBC subunit, PTS system, glucose subfamily, IIA subunit, PTS system, glucose-like IIB subunint; KEGG: ptsG, PTS system glucose-specific transporter subunit IIABC; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site, sugar-specific permease EIIA 1 domain-containing protein.
 
   
 0.402
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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