STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3205KEGG: SelA-related pyridoxal phosphate-dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: Pyridoxal phosphate-dependent transferase. (373 aa)    
Predicted Functional Partners:
UFO1_3204
KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF1341; PFAM: protein of unknown function DUF1341.
 
 
  0.997
UFO1_3211
Hypothetical protein; KEGG: putative amidohydrolase.
 
  
 0.966
UFO1_3801
KEGG: 2-dehydro-3-deoxygluconokinase; PFAM: PfkB domain protein.
  
 
 0.931
UFO1_3832
2-dehydro-3-deoxygluconokinase; KEGG: kdgK, 2-keto-3-deoxygluconate kinase; PFAM: PfkB domain protein.
  
 
 0.931
UFO1_3206
KEGG: inner membrane protein; TIGRFAM: Protein of unknown function DUF4310; PFAM: Protein of unknown function DUF4310.
 
     0.930
UFO1_3207
KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03580; PFAM: Conserved hypothetical protein CHP03580.
 
     0.930
UFO1_3208
PFAM: Conserved hypothetical protein CHP03578; KEGG: hypothetical protein.
 
    0.913
UFO1_3209
KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03577; PFAM: Conserved hypothetical protein CHP03577.
 
     0.913
UFO1_0312
PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: PTS system, IIc component.
  
 
  0.905
UFO1_0311
Protein-N(pi)-phosphohistidine--sugar phosphotransferase; KEGG: PTS system sorbose subfamily transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component.
    
  0.902
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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