STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3347PTS system, mannose/fructose/sorbose family, IIC subunit; KEGG: sorA, sorbose permease IIC component PTS system sorbose-specific EIIC component, EIIC-Sor; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit. (255 aa)    
Predicted Functional Partners:
UFO1_3346
KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component.
 0.999
UFO1_1079
KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component.
 0.997
UFO1_0313
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID.
 0.996
UFO1_3348
TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: PTS system sorbose-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component.
 
 0.996
UFO1_3349
KEGG: PTS system mannose/fructose/sorbose family transporter subunit IIA; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component.
 
 0.996
UFO1_3344
TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: PTS system sorbose-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component.
 
 0.993
UFO1_1076
KEGG: PTS system mannose/fructose/sorbose family transporter subunit IIA; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component.
 
 0.989
UFO1_0310
PFAM: PTS system fructose subfamily IIA component; KEGG: PTS system fructose IIA component.
 
 0.988
UFO1_3950
KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component.
 
 0.960
UFO1_3949
PFAM: PTS system fructose subfamily IIA component; KEGG: PTS system fructose subfamily transporter subunit IIA.
 
 
 0.913
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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