STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3369PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein. (286 aa)    
Predicted Functional Partners:
UFO1_3368
KEGG: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein.
   
   0.656
UFO1_3367
TIGRFAM: phosphate acetyltransferase; KEGG: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
  
  
 0.520
UFO1_1164
Transcriptional regulator, MarR family with acetyltransferase activity; KEGG: DNA-binding protein; PFAM: GCN5-related N-acetyltransferase, regulatory protein MarR; SMART: regulatory protein MarR.
 
   
 0.447
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.