STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3431KEGG: hypothetical protein. (505 aa)    
Predicted Functional Partners:
UFO1_4491
PFAM: Ankyrin repeat-containing domain-containing protein; KEGG: ankyrin.
   
 
 0.670
UFO1_3430
PFAM: lipase class 3; KEGG: hypothetical protein.
       0.558
UFO1_3429
PFAM: lipase class 3; KEGG: hypothetical protein.
       0.527
UFO1_0201
PFAM: Methyltransferase type 11; KEGG: S-adenosylmethionine-dependent methyltransferase.
 
    0.525
UFO1_3700
TIGRFAM: metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: rpfG5, cyclic di-GMP phosphodiesterase response regulator RpfG; SMART: metal-dependent phosphohydrolase HD region.
  
  
 0.425
UFO1_1405
PFAM: Alkaline phosphatase; KEGG: alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.
 
  
 0.418
UFO1_3290
PFAM: nitroreductase; KEGG: nitroreductase.
  
     0.418
UFO1_3871
3-dehydro-L-gulonate 2-dehydrogenase; KEGG: malate/lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
  
     0.408
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.