STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3580Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR, sugar isomerase (SIS); KEGG: putative RpiR family transcriptional regulator. (256 aa)    
Predicted Functional Partners:
UFO1_3579
TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit, PTS system, glucose subfamily, IIA subunit, PTS system, glucose-like IIB subunint; KEGG: PTS system, alpha-glucoside-specific IIBC subunit; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site, sugar-specific permease EIIA 1 domain-containing protein.
 
  
 0.912
UFO1_3574
KEGG: glvA_1, maltose-6'-phosphate glucosidase; PFAM: glycoside hydrolase family 4, Glycosyl hydrolase, family 4, C-terminal.
 
  
 0.828
UFO1_3177
TIGRFAM: PTS system, glucose-specific IIBC subunit, PTS system, glucose subfamily, IIA subunit, PTS system, glucose-like IIB subunint; KEGG: ptsG, PTS system glucose-specific transporter subunit IIABC; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site, sugar-specific permease EIIA 1 domain-containing protein.
 
  
 0.740
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.601
UFO1_3577
KEGG: putative hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3.
 
   
 0.562
UFO1_3201
KEGG: 6-phospho-beta-glucosidase; PFAM: glycoside hydrolase family 4, Glycosyl hydrolase, family 4, C-terminal.
 
  
 0.539
UFO1_3320
KEGG: PTS system N-acetylglucosamine-specific transporter subunit IIBC; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit, PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site.
 
  
 0.523
UFO1_0110
Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS), helix-turn-helix protein RpiR; KEGG: RpiR family transcriptional regulator.
  
     0.507
UFO1_3578
Oligo-1,6-glucosidase; PFAM: alpha amylase catalytic region; KEGG: Oligo-1,6-glucosidase; SMART: alpha amylase catalytic sub domain-containing protein.
  
  
 0.487
UFO1_3954
KEGG: mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I.
 
  
 0.466
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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