STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3815KEGG: hypothetical protein; PFAM: Tetratricopeptide repeat-containing protein; SMART: Tetratricopeptide repeat-containing protein. (768 aa)    
Predicted Functional Partners:
UFO1_3814
KEGG: pgaB, outer membrane polysaccharide N-deacetylase; TIGRFAM: Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB; PFAM: polysaccharide deacetylase.
       0.711
UFO1_3813
TIGRFAM: Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA; KEGG: family 2 glycosyl transferase.
     
 0.685
UFO1_3812
KEGG: hypothetical protein; TIGRFAM: Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD; PFAM: Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD.
       0.668
UFO1_4071
PFAM: Peptidase M23; KEGG: peptidase.
   
 
 0.571
UFO1_2891
SMART: Tetratricopeptide repeat-containing protein; KEGG: hypothetical protein.
 
  
 0.568
UFO1_3817
KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
 
   
 0.512
UFO1_4094
SMART: Tetratricopeptide repeat-containing protein; KEGG: TPR repeat-containing protein.
 
  
 0.504
UFO1_0047
KEGG: hypothetical protein.
 
  
 0.497
UFO1_4651
KEGG: hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein, Tetratricopeptide TPR_2 repeat-containing protein, MORN repeat-containing protein; SMART: Tetratricopeptide repeat-containing protein, MORN repeat-containing protein.
 
  
 0.443
UFO1_2655
PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: hypothetical protein.
 
  
 0.421
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.