STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_3833Hypothetical protein; KEGG: sugar phosphate isomerase/epimerase. (253 aa)    
Predicted Functional Partners:
UFO1_3832
2-dehydro-3-deoxygluconokinase; KEGG: kdgK, 2-keto-3-deoxygluconate kinase; PFAM: PfkB domain protein.
  
 0.871
UFO1_3801
KEGG: 2-dehydro-3-deoxygluconokinase; PFAM: PfkB domain protein.
  
 0.727
UFO1_3208
PFAM: Conserved hypothetical protein CHP03578; KEGG: hypothetical protein.
  
     0.575
UFO1_3830
PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator family transporter.
 
    0.569
UFO1_3206
KEGG: inner membrane protein; TIGRFAM: Protein of unknown function DUF4310; PFAM: Protein of unknown function DUF4310.
  
     0.544
UFO1_3207
KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03580; PFAM: Conserved hypothetical protein CHP03580.
  
     0.544
UFO1_3164
Acetolactate synthase; KEGG: iolD, myo-inositol catabolism protein IolD; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein, thiamine pyrophosphate central domain-containing protein; Belongs to the TPP enzyme family.
  
  
 0.537
UFO1_3166
PFAM: KduI/IolB isomerase; KEGG: myo-inositol catabolism protein IolB.
  
  
 0.524
UFO1_3209
KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03577; PFAM: Conserved hypothetical protein CHP03577.
  
     0.521
UFO1_3834
KEGG: transcriptional regulator; PFAM: regulatory protein LacI; SMART: regulatory protein LacI.
  
  
 0.518
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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