STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_4132PFAM: Rubrerythrin; KEGG: hypothetical protein. (116 aa)    
Predicted Functional Partners:
UFO1_4131
PFAM: Linocin M18 bacteriocin protein; KEGG: hypothetical protein.
 
 
 
 0.984
UFO1_4133
Hypothetical protein.
       0.773
UFO1_4297
PFAM: GCN5-related N-acetyltransferase; KEGG: GCN5-like N-acetyltransferase.
  
     0.698
UFO1_4135
KEGG: hypothetical protein.
 
     0.680
UFO1_3860
KEGG: hypothetical protein.
  
     0.672
UFO1_1891
PFAM: Domain of unknown function DUF1901; KEGG: hypothetical protein.
  
     0.670
UFO1_4134
Hypothetical protein.
       0.642
UFO1_1209
SMART: regulatory protein MarR; KEGG: MarR family transcriptional regulator.
  
     0.620
UFO1_0027
KEGG: radical SAM domain-containing protein; PFAM: cobalamin B12-binding domain protein, Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
  
     0.583
UFO1_3482
KEGG: hypothetical protein.
  
     0.583
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.