Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
UFO1_1817 | UFO1_4498 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein. | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | 0.422 |
UFO1_4497 | UFO1_4498 | KEGG: small GTP-binding protein; TIGRFAM: [FeFe]-hydrogenase H-cluster maturation GTPase HydF, small GTP-binding protein; PFAM: GTP1/OBG protein. | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | 0.499 |
UFO1_4497 | UFO1_4499 | KEGG: small GTP-binding protein; TIGRFAM: [FeFe]-hydrogenase H-cluster maturation GTPase HydF, small GTP-binding protein; PFAM: GTP1/OBG protein. | KEGG: hypothetical protein. | 0.436 |
UFO1_4498 | UFO1_1817 | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein. | 0.422 |
UFO1_4498 | UFO1_4497 | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | KEGG: small GTP-binding protein; TIGRFAM: [FeFe]-hydrogenase H-cluster maturation GTPase HydF, small GTP-binding protein; PFAM: GTP1/OBG protein. | 0.499 |
UFO1_4498 | UFO1_4499 | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | KEGG: hypothetical protein. | 0.706 |
UFO1_4498 | UFO1_4500 | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | PFAM: Peptidase M23; KEGG: Peptidase M23. | 0.483 |
UFO1_4498 | UFO1_4501 | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | PFAM: protein of unknown function DUF583; KEGG: hypothetical protein. | 0.454 |
UFO1_4499 | UFO1_4497 | KEGG: hypothetical protein. | KEGG: small GTP-binding protein; TIGRFAM: [FeFe]-hydrogenase H-cluster maturation GTPase HydF, small GTP-binding protein; PFAM: GTP1/OBG protein. | 0.436 |
UFO1_4499 | UFO1_4498 | KEGG: hypothetical protein. | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | 0.706 |
UFO1_4499 | UFO1_4500 | KEGG: hypothetical protein. | PFAM: Peptidase M23; KEGG: Peptidase M23. | 0.592 |
UFO1_4499 | UFO1_4501 | KEGG: hypothetical protein. | PFAM: protein of unknown function DUF583; KEGG: hypothetical protein. | 0.512 |
UFO1_4500 | UFO1_4498 | PFAM: Peptidase M23; KEGG: Peptidase M23. | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | 0.483 |
UFO1_4500 | UFO1_4499 | PFAM: Peptidase M23; KEGG: Peptidase M23. | KEGG: hypothetical protein. | 0.592 |
UFO1_4500 | UFO1_4501 | PFAM: Peptidase M23; KEGG: Peptidase M23. | PFAM: protein of unknown function DUF583; KEGG: hypothetical protein. | 0.793 |
UFO1_4501 | UFO1_4498 | PFAM: protein of unknown function DUF583; KEGG: hypothetical protein. | PFAM: protein of unknown function DUF554; KEGG: hypothetical protein. | 0.454 |
UFO1_4501 | UFO1_4499 | PFAM: protein of unknown function DUF583; KEGG: hypothetical protein. | KEGG: hypothetical protein. | 0.512 |
UFO1_4501 | UFO1_4500 | PFAM: protein of unknown function DUF583; KEGG: hypothetical protein. | PFAM: Peptidase M23; KEGG: Peptidase M23. | 0.793 |