STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_4550KEGG: D-isomer specific 2-hydroxyacid dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein. (325 aa)    
Predicted Functional Partners:
UFO1_4012
TIGRFAM: glycerate kinase; KEGG: glycerate kinase; PFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.929
UFO1_4669
TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding protein.
 
  
 0.922
UFO1_0400
KEGG: aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.910
UFO1_3146
KEGG: xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the hyi family.
   
 
 0.910
UFO1_0363
KEGG: 2-dehydro-3-deoxyphosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
    
  0.905
UFO1_3800
KEGG: kdgA, KHG/KDPG aldolase KdgA; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase.
    
  0.905
UFO1_3828
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: kdgA, KHG/KDPG aldolase KdgA; PFAM: KDPG and KHG aldolase.
    
  0.905
UFO1_0213
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; KEGG: haloacid dehalogenase-like family hydrolase.
    
  0.903
UFO1_4435
KEGG: 5'-nucleotidase.
    
  0.903
UFO1_0364
KEGG: glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein, D-isomer specific 2-hydroxyacid dehydrogenase catalytic region-containing protein.
 
  
0.847
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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