STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_4601KEGG: methylmalonyl-CoA decarboxylase; PFAM: Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)    
Predicted Functional Partners:
UFO1_3172
KEGG: bcd2, butyryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein.
 
 0.991
UFO1_3313
KEGG: acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein.
 
 0.991
UFO1_3593
TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein, Alcohol dehydrogenase GroES domain protein; KEGG: quinone oxidoreductase; SMART: Polyketide synthase, enoylreductase.
 
 0.936
UFO1_3173
KEGG: coenzyme A transferase; PFAM: coenzyme A transferase; SMART: coenzyme A transferase; Belongs to the 3-oxoacid CoA-transferase family.
 
  
 0.927
UFO1_0091
KEGG: acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein.
 
 0.925
UFO1_2959
TIGRFAM: methylmalonyl-CoA epimerase; KEGG: methylmalonyl-CoA epimerase.
  
 
 0.924
UFO1_3041
TIGRFAM: methylmalonyl-CoA epimerase; KEGG: methylmalonyl-CoA epimerase.
  
 
 0.924
UFO1_0207
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: atoB, acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.922
UFO1_3093
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.922
UFO1_3314
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: atoB, acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.922
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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