STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_4645KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer. (279 aa)    
Predicted Functional Partners:
UFO1_3821
KEGG: cheA2, chemotaxis protein histidine kinase CheA2; PFAM: CheW domain protein, Hpt domain protein, ATP-binding region ATPase domain protein, response regulator receiver, Signal transducing histidine kinase homodimeric; SMART: Hpt domain protein, ATP-binding region ATPase domain protein, CheW domain protein, response regulator receiver.
 
 
 0.965
UFO1_2556
KEGG: CheA signal transduction histidine kinase; PFAM: CheW domain protein, Hpt domain protein, Signal transducing histidine kinase homodimeric, ATP-binding region ATPase domain protein, P2 response regulator binding domain protein; SMART: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein.
 
 
 0.902
UFO1_0840
CheA signal transduction histidine kinase; KEGG: chemotaxis protein histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein, Signal transducing histidine kinase homodimeric, P2 response regulator binding domain protein, CheW domain protein, Hpt domain protein; SMART: CheW domain protein, ATP-binding region ATPase domain protein, Hpt domain protein.
 
 
 0.901
UFO1_2555
KEGG: cheW, putative chemotaxis protein CheW; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.880
UFO1_4305
KEGG: cheW2, chemotaxis protein Chew; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.880
UFO1_0791
KEGG: cheV, putative chemotaxis protein CheV; PFAM: CheW domain protein, response regulator receiver; SMART: CheW domain protein, response regulator receiver.
 
 
 0.875
UFO1_0841
KEGG: CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.867
UFO1_2893
KEGG: cheV, putative chemotaxis protein CheV; PFAM: CheW domain protein, response regulator receiver; SMART: CheW domain protein, response regulator receiver.
 
 
 0.866
UFO1_0378
CheW protein; KEGG: chemotaxis signal transduction protein; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.848
UFO1_3820
KEGG: cheW2, protein CheW2; PFAM: CheW domain protein; SMART: CheW domain protein.
 
 
 0.839
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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