STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UFO1_4760KEGG: metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; SMART: metal-dependent phosphohydrolase HD region. (378 aa)    
Predicted Functional Partners:
UFO1_0965
TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, CBS domain containing protein, GGDEF domain containing protein; KEGG: diguanylate cyclase/phosphodiesterase; SMART: EAL domain-containing protein, GGDEF domain containing protein.
 
 
 0.672
UFO1_1500
Diguanylate cyclase; SMART: GGDEF domain containing protein, GAF domain protein; TIGRFAM: diguanylate cyclase; KEGG: GAF sensor diguanylate cyclase; PFAM: GGDEF domain containing protein.
 
 
 0.671
UFO1_0185
TIGRFAM: diguanylate cyclase; PFAM: EAL domain-containing protein, GGDEF domain containing protein, Cache domain protein; KEGG: PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; SMART: EAL domain-containing protein, GGDEF domain containing protein.
 
   
 0.608
UFO1_0428
TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein, PAS domain containing protein; KEGG: hypothetical protein; SMART: GGDEF domain containing protein, PAS domain containing protein, PAC repeat-containing protein.
   
 0.604
UFO1_0704
TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: GGDEF domain containing protein; KEGG: sensor diguanylate cyclase, PAS domain-containing; SMART: GGDEF domain containing protein, PAS domain containing protein.
 
 0.603
UFO1_4356
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein; KEGG: PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; SMART: EAL domain-containing protein, PAS domain containing protein, PAC repeat-containing protein, GGDEF domain containing protein.
 
   
 0.595
UFO1_3520
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase (GGDEF) domain-containing protein; SMART: GGDEF domain containing protein.
  
 
 0.593
UFO1_1581
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: pleD-like protein; SMART: GGDEF domain containing protein.
 
 
 0.589
UFO1_0386
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase; SMART: GGDEF domain containing protein.
 
 
 0.578
UFO1_1814
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: signal chemotaxis receptor; SMART: GGDEF domain containing protein.
  
 
 0.571
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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