STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJE38493.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)    
Predicted Functional Partners:
KJE38492.1
Toxin secretion, membrane fusion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
KJE41662.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.946
KJE43230.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.941
msbA
Lipid transporter ATP-binding/permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
 
 
0.890
KJE41350.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.885
KJE43215.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.884
KJE38162.1
Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.883
KJE40160.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.868
KJE41751.1
Outer membrane channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.833
KJE39561.1
Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.789
Your Current Organism:
Thalassomonas actiniarum
NCBI taxonomy Id: 485447
Other names: MBIC 08328, NBRC 104231, NCIMB 14418, T. actiniarum, Thalassomonas actiniarum Hosoya et al. 2009, Thalassomonas sp. A5K-106, strain A5K-106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.