STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJE38013.1EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)    
Predicted Functional Partners:
KJE38014.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
KJE42559.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.994
KJE38012.1
Hcp1 family type VI secretion system effector; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
KJE38473.1
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.989
KJE38015.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
KJE39362.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.969
KJE42554.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.968
KJE41914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.967
KJE38007.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.
 
 0.965
KJE38011.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.952
Your Current Organism:
Thalassomonas actiniarum
NCBI taxonomy Id: 485447
Other names: MBIC 08328, NBRC 104231, NCIMB 14418, T. actiniarum, Thalassomonas actiniarum Hosoya et al. 2009, Thalassomonas sp. A5K-106, strain A5K-106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.