STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF13750.1RNase adaptor protein RapZ; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
OLF13751.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.977
OLF13752.1
DNA-binding protein WhiA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.949
OLF08805.1
Ribonuclease E/G; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.940
OLF04658.1
2-phospho-L-lactate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.874
OLF13749.1
Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.849
OLF04934.1
Phosphoglucosamine mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.754
OLF11237.1
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.653
OLF13748.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.579
OLF13684.1
GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
OLF13739.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.508
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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