STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF12895.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)    
Predicted Functional Partners:
OLF04889.1
Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.809
OLF14434.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.697
OLF11716.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.697
OLF10549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.697
OLF05233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.697
OLF05236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.697
OLF12896.1
Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
OLF13190.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.661
OLF05574.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.641
OLF14179.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.613
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.