STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF12165.1Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
OLF10681.1
Silent information regulator protein Sir2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
OLF10695.1
Pectin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.991
OLF12041.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.959
OLF12166.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.904
OLF10694.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.781
OLF12271.1
Cellobiohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.773
BLA60_35775
Xyloglucanase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.766
OLF05140.1
Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.764
OLF09687.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
OLF14407.1
Poly(3-hydroxybutyrate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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