STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF11484.11,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
OLF12064.1
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.914
OLF09845.1
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.877
OLF05154.1
Beta-1 4-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.857
OLF09692.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.840
OLF14029.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.803
OLF09687.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.800
OLF13124.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.793
OLF14399.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.789
OLF12271.1
Cellobiohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.781
OLF05140.1
Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.775
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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