STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF10021.1phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (839 aa)    
Predicted Functional Partners:
OLF10276.1
phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OLF08455.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.990
OLF13707.1
alanine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.989
OLF05431.1
isoleucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.988
OLF10976.1
30S ribosomal protein S3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.985
OLF14047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.984
OLF13047.1
Protein translocase subunit SecDF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.982
OLF13647.1
threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.974
OLF10991.1
DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.974
OLF04971.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.974
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.