STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF05920.1Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)    
Predicted Functional Partners:
OLF07137.1
Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.989
OLF11591.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.961
cysM
Cysteine synthase B; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.934
OLF11951.1
CoA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
  0.931
OLF09874.1
2,3-diaminopropionate biosynthesis protein SbnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.919
OLF05287.1
2,3-diaminopropionate biosynthesis protein SbnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.915
OLF13699.1
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.913
OLF11952.1
Homoserine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.906
OLF09111.1
2,3-diaminopropionate biosynthesis protein SbnA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.906
OLF09702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.905
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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