STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF05436.1YggS family pyridoxal phosphate enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
OLF05437.1
Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.982
OLF05435.1
Cell division protein SepF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.963
OLF05434.1
YggT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.864
OLF05438.1
Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.858
OLF05433.1
Cell division initiation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.822
OLF05446.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.799
OLF07087.1
Pyrroline-5-carboxylate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.781
OLF05441.1
UDP-N-acetylmuramate--L-alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.682
OLF05444.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.647
OLF12734.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.615
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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