STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF04955.1DUF4873 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)    
Predicted Functional Partners:
OLF07617.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.817
OLF10955.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.770
OLF14116.1
Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.724
OLF04953.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
OLF04987.1
Ribosomal-protein-alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
OLF04954.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.675
OLF07772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.660
OLF08092.1
F0F1 ATP synthase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.630
OLF12377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.626
OLF08091.1
F0F1 ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.625
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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