STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF04981.1Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)    
Predicted Functional Partners:
OLF14447.1
Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.981
OLF08658.1
3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.981
OLF07356.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.981
OLF13712.1
Chorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.972
OLF06556.1
3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.963
OLF07504.1
Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.909
OLF06303.1
Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.898
OLF11105.1
Aminodeoxychorismate synthase, component I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.892
OLF13713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.887
OLF12971.1
3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.874
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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