STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLF04372.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)    
Predicted Functional Partners:
OLF04371.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OLF13740.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.959
OLF13762.1
Transaldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.916
OLF08839.1
Ribose-5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.902
OLF13763.1
Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.844
OLF11066.1
Phosphopyruvate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.825
OLF13755.1
Triose-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.823
OLF13753.1
Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.818
OLF13761.1
Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.806
OLF09422.1
Galactose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.804
Your Current Organism:
Actinophytocola xinjiangensis
NCBI taxonomy Id: 485602
Other names: A. xinjiangensis, Actinophytocola sp. QAIII60, Actinophytocola xinjiangensis Guo et al. 2011, Amycolatopsis sp. QAIII60, CGMCC 4.4663, DSM 45854, NBRC 106673, strain QAIII60
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