STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_0133KEGG: vfi:VF_0189 hypothetical protein; SPTR: C1MW95 Lysosomal cystine transporter family (Fragment). (100 aa)    
Predicted Functional Partners:
Krac_0132
TRAG family protein; COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: swi:Swit_5000 TraG family protein; PFAM: TRAG family protein; SPTR: A5VH50 TRAG family protein; PFAM: TraG/TraD family.
       0.773
Krac_0130
Hypothetical protein; KEGG: ach:Achl_1171 mucin-associated surface protein; SPTR: B8HEP6 Mucin-associated surface protein.
       0.645
Krac_0131
KEGG: pna:Pnap_4171 hypothetical protein; SPTR: A1VUX8 Putative uncharacterized protein.
       0.645
Krac_0134
KEGG: mbt:JTY_3101 hypothetical protein; SPTR: C6J723 Putative uncharacterized protein.
       0.588
Krac_0129
KEGG: hypothetical protein; SPTR: Q7SH82 Predicted protein.
       0.400
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.