Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Krac_0268 | Krac_0269 | Integrase catalytic region; COGs: COG3316 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: amr:AM1_G0038 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: B4WSU5 Integrase core domain protein; PFAM: Transposase IS66 family. | Hypothetical protein; KEGG: cyn:Cyan7425_0088 transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A6C7W7 Transposase. | 0.682 |
Krac_0269 | Krac_0268 | Hypothetical protein; KEGG: cyn:Cyan7425_0088 transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A6C7W7 Transposase. | Integrase catalytic region; COGs: COG3316 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: amr:AM1_G0038 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: B4WSU5 Integrase core domain protein; PFAM: Transposase IS66 family. | 0.682 |