STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_0441COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322:IPR000209:IPR017853; KEGG: rxy:Rxyl_2099 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; SPTR: D1C8H0 Alpha-glucosidase; PFAM: Glycosyl hydrolases family 31; Belongs to the glycosyl hydrolase 31 family. (822 aa)    
Predicted Functional Partners:
Krac_2880
Glucan 1,4-alpha-glucosidase; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterProIPR008928:IPR011013:IPR008960:IPR014756:IPR 015220:IPR011613:IPR019248:IPR014718:IPR012341:IPR015922; KEGG: cai:Caci_7156 glucan 1,4-alpha-glucosidase; PFAM: Glucodextranase N; glycoside hydrolase 15-related; Protein of unknown function DUF2223; PRIAM: Glucan 1,4-alpha-glucosidase; SPTR: C7Q6X2 Glucan 1,4-alpha-glucosidase; PFAM: Glycosyl hydrolases family 15; Glucodextranase, domain N; Domain of unknown function (DUF2223); TIGRFAM: glucan 1,4-alpha-glucosidase.
  
 
 0.765
Krac_3469
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR013781:IPR006589:IPR017853:IPR006047; KEGG: cyc:PCC7424_3146 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: B7KCJ7 Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain.
 
 
 0.763
EFH88554.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterProIPR006047:IPR017853:IPR013781:IPR013780:IPR 006589; KEGG: rca:Rcas_3863 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: A7NQQ3 Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain.
  
 
 0.735
Krac_0976
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterProIPR001956:IPR013781:IPR018087:IPR017853:IPR 008965:IPR001547; KEGG: ace:Acel_0614 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; SPTR: P54583 Endoglucanase E1; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5).
    
 0.701
Krac_9959
Glycoside hydrolase family 5; COGs: COG2730 Endoglucanase; InterProIPR017853:IPR008965:IPR001956:IPR013781:IPR 018087:IPR001547; KEGG: ace:Acel_0614 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; type 3a cellulose-binding domain protein; SPTR: P54583 Endoglucanase E1; PFAM: Cellulose binding domain; Cellulase (glycosyl hydrolase family 5).
    
 0.701
Krac_2564
COGs: COG1621 Beta-fructosidase (levanase/invertase); InterProIPR001362:IPR018053:IPR008985:IPR013148:IPR 013189; KEGG: bsu:BSU27030 levanase; PFAM: Glycosyl hydrolase family 32 domain protein; PRIAM: Fructan beta-fructosidase; SMART: glycoside hydrolase family 32; SPTR: P05656 Levanase; PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain.
     
 0.700
Krac_4243
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterProIPR006047:IPR006048:IPR013781:IPR013780:IPR 017853:IPR006589; KEGG: hau:Haur_2969 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Q60051 Alpha-amylase; PFAM: Alpha amylase, catalytic domain.
 
 
 0.690
Krac_2561
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173:IPR011611; KEGG: sme:SMc02164 fructokinase protein; PFAM: PfkB domain protein; SPTR: C1XXA7 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
   
 
 0.632
Krac_4319
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611:IPR002173; KEGG: dfe:Dfer_5700 PfkB domain protein; PFAM: PfkB domain protein; SPTR: C1XJU2 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
   
 
 0.632
Krac_3504
Glycoside hydrolase clan GH-D; COGs: COG3345 Alpha-galactosidase; InterPro IPR013785:IPR017853:IPR002252:IPR000111; KEGG: ttr:Tter_2439 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D; SPTR: D1CHW2 Glycoside hydrolase clan GH-D; PFAM: Melibiase.
 
  
 0.608
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.