STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_0569InterPro IPR011013; KEGG: hypothetical protein; SPTR: C6IY51 Putative uncharacterized protein. (328 aa)    
Predicted Functional Partners:
Krac_9829
PTS system, N-acetylglucosamine-specific IIBC subunit; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR001996:IPR013013:IPR010974:IPR018113:IPR 003352; KEGG: rxy:Rxyl_1733 phosphotransferase system, N-acetylglucosamine-specific IIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; SPTR: Q1AV85 Phosphotransferase system, N-acetylglucosamine-specific IIBC component; TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PFAM: Phosphotransferase system, E [...]
     
 0.800
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
 0.753
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
 0.753
tal-3
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
   
 0.753
EFH88769.1
Galactokinase; COGs: COG0153 Galactokinase; InterProIPR019539:IPR006204:IPR013750:IPR020568:IPR 000705:IPR019741:IPR006203:IPR006206:IPR014721; KEGG: hor:Hore_20660 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; SPTR: B8CZV9 Galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.728
Krac_4655
Galactokinase; COGs: COG0153 Galactokinase; InterProIPR014721:IPR020568:IPR006206:IPR000705:IPR 006204:IPR013750; KEGG: ttr:Tter_2202 GHMP kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: Galactokinase; SPTR: D1CH81 GHMP kinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain.
  
 0.728
Krac_4653
COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterProIPR019779:IPR001937:IPR011151:IPR011146:IPR 005849:IPR005850; KEGG: ttr:Tter_2204 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: D1CH83 Galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltran [...]
 
 0.639
EFH88770.1
COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterProIPR005849:IPR005850:IPR011146:IPR001937:IPR 011151; KEGG: hor:Hore_20670 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: B8CZW0 Galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, [...]
  
 0.590
Krac_0570
Coagulation factor 5/8 type domain protein; InterProIPR002241:IPR013785:IPR013780:IPR002345:IPR 013222:IPR000421:IPR000111:IPR018905:IPR017853:IPR008979; KEGG: cai:Caci_5007 alpha-galactosidase; PFAM: coagulation factor 5/8 type domain protein; Glycosyl hydrolase family 98 putative carbohydrate binding module; Alpha-galactosidase, NPCBM associated NEW3 domain; glycoside hydrolase clan GH-D; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: C7Q3D1 Alpha-galactosidase; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase; F5/8 type C domain; NPCBM/NEW2 [...]
  
 
  0.540
Krac_4697
Transcriptional regulator, RpiR family; COGs: COG1737 Transcriptional regulators; InterPro IPR000281:IPR001347; KEGG: bha:BH2675 RpiR transcriptional regulator; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Q9K9H2 Transcriptional regulator (RpiR family); PFAM: Helix-turn-helix domain, rpiR family; SIS domain.
  
  
  0.515
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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