Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Krac_0603 | Krac_0604 | InterPro IPR005180; KEGG: rlg:Rleg_0019 hypothetical protein; SPTR: C6AYA7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302. | Transposase IS4 family protein; InterPro IPR014736:IPR014737:IPR002559:IPR012337; KEGG: gvi:gll0371 putative transposase; PFAM: transposase IS4 family protein; SPTR: Q7M7G3 Gll0371 protein; PFAM: Transposase DDE domain. | 0.519 |
Krac_0604 | Krac_0603 | Transposase IS4 family protein; InterPro IPR014736:IPR014737:IPR002559:IPR012337; KEGG: gvi:gll0371 putative transposase; PFAM: transposase IS4 family protein; SPTR: Q7M7G3 Gll0371 protein; PFAM: Transposase DDE domain. | InterPro IPR005180; KEGG: rlg:Rleg_0019 hypothetical protein; SPTR: C6AYA7 Putative uncharacterized protein; PFAM: Domain of unknown function DUF302. | 0.519 |