STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_0649TPR repeat-containing protein; InterPro IPR011990:IPR019734:IPR013026:IPR001440; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: B7K3M3 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat. (118 aa)    
Predicted Functional Partners:
EFH90958.1
TPR repeat-containing protein; InterProIPR019734:IPR013026:IPR011990:IPR013105:IPR 001440; KEGG: npu:Npun_F4764 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: D1J927 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
 
 0.844
EFH89617.1
TPR repeat-containing protein; InterPro IPR019734:IPR013026:IPR001440:IPR011990; KEGG: TPR Domain containing protein; PFAM: TPR repeat-containing protein; SPTR: A0YWU0 TPR repeat protein; PFAM: Tetratricopeptide repeat.
 
  0.815
EFH90276.1
TPR repeat-containing protein; InterPro IPR019734:IPR011990:IPR001440:IPR013026; KEGG: cyc:PCC7424_1361 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: B7K7N7 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
  
   0.781
Krac_0648
COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441:IPR008271:IPR020635:IPR002290:IPR 000719:IPR017442:IPR011009; KEGG: sro:Sros_3455 WD40 repeat-domain-containing protein-like protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; SPTR: A5UYN6 Protein kinase; PFAM: Protein kinase domain.
   
  0.777
Krac_4708
TPR repeat-containing protein; InterProIPR019734:IPR013026:IPR011990:IPR013105:IPR 001440; KEGG: mar:MAE_03610 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: D1J927 Putative uncharacterized protein; PFAM: Tetratricopeptide repeat.
  
 
  0.768
Krac_6841
Tetratricopeptide TPR_2 repeat protein; InterProIPR019734:IPR013026:IPR011990:IPR001440:IPR 013105; KEGG: mem:Memar_1823 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: B4VK79 Tetratricopeptide repeat family; PFAM: Tetratricopeptide repeat.
  
     0.751
EFH88743.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Q3M [...]
 
 0.744
Krac_8832
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR011006; KEGG: mxa:MXAN_4640 sensor histidine kinase/response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Q1D3G7 Sensor protein; PFAM: Response regulator receiver domain.
    
 0.744
Krac_9408
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: rmr:Rmar_0513 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: D0MEW5 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain.
 
 
 0.743
EFH88736.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082:IPR002052; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; [...]
 
 0.742
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.