STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Krac_0835Cyclase family protein; COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: tpe:Tpen_1663 cyclase family protein; PFAM: cyclase family protein; SPTR: C0CSZ0 Putative uncharacterized protein; PFAM: Putative cyclase. (250 aa)    
Predicted Functional Partners:
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.843
Krac_4219
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR001041:IPR013027:IPR001450:IPR012285:IPR 016040:IPR017900:IPR017896:IPR000759:IPR009051; KEGG: csc:Csac_0621 molybdopterin oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A4XH60 Molybdopterin oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain.
    
  0.747
Krac_7555
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR000759:IPR012285:IPR016040:IPR001041:IPR 017896:IPR013027:IPR001450:IPR009051:IPR017900; KEGG: csc:Csac_0621 molybdopterin oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A4XH60 Molybdopterin oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain.
    
  0.747
Krac_7768
Biotin/lipoyl attachment domain-containing protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR011053:IPR000089; KEGG: dau:Daud_1015 pyruvate carboxylase subunit B; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: B1I3L5 Acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein.
    
  0.731
Krac_8761
COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: plu:plu1434 hypothetical protein; PFAM: tryptophan 23-dioxygenase; SPTR: Q2B8C5 Putative uncharacterized protein; PFAM: Tryptophan 2,3-dioxygenase.
  
 
 0.730
Krac_6794
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002869:IPR009014:IPR019752:IPR015941:IPR 002880; KEGG: chl:Chy400_1038 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B9LLV4 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
  0.667
Krac_0836
Tartrate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804:IPR019818:IPR011829; KEGG: kol:Kole_0991 tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Tartrate decarboxylase; SPTR: C5CH34 Tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; tartrate dehydrogenase.
       0.631
Krac_0834
Hypothetical protein; KEGG: bcv:Bcav_4187 alcohol dehydrogenase GroES domain protein; SPTR: C5C667 Alcohol dehydrogenase GroES domain protein.
       0.558
Krac_2065
Protein of unknown function DUF849; COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: mjl:Mjls_4764 hypothetical protein; PFAM: protein of unknown function DUF849; SPTR: Q1B3P7 Putative uncharacterized protein; PFAM: Prokaryotic protein of unknown function (DUF849).
  
    0.543
Krac_1239
Cyclic nucleotide-binding protein; COGs: COG1142 Fe-S-cluster-containing hydrogenase components 2; InterProIPR000595:IPR001450:IPR017900:IPR018488:IPR 014710:IPR018490:IPR017896; KEGG: mmb:Mmol_1047 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SMART: cyclic nucleotide-binding; SPTR: C5V5M5 Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain.
   
 
  0.487
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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