STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_0842Putative transposase IS891/IS1136/IS1341 family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: min:Minf_2377 transposon IS605 OrfB; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; SPTR: B3E0V4 Transposon IS605 OrfB; PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region. (387 aa)    
Predicted Functional Partners:
Krac_0843
Resolvase domain protein; COGs: COG2452 site-specific integrase-resolvase; InterPro IPR006119:IPR006118:IPR009061:IPR000551; KEGG: ere:EUBREC_1082 DNA invertase; PFAM: Resolvase domain; regulatory protein MerR; SPTR: D0SXC4 Putative uncharacterized protein; PFAM: Resolvase, N terminal domain.
       0.773
Krac_5704
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.769
Krac_6781
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.768
Krac_8436
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; manually curated; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.768
Krac_0773
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; manually curated; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.766
EFH88597.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.766
EFH88722.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.766
Krac_3357
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.766
Krac_3530
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; manually curated; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.766
Krac_5740
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: tpd:Teth39_2090 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: B0K7E7 Transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.766
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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