STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krac_0872Protein of unknown function DUF1486; InterPro IPR009959; KEGG: rop:ROP_32090 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: D0XU81 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase. (159 aa)    
Predicted Functional Partners:
Krac_5333
Protein of unknown function DUF1486; COGs: COG5485 ester cyclase; InterPro IPR009959; KEGG: gym:GYMC10_0548 protein of unknown function DUF1486; PFAM: protein of unknown function DUF1486; SPTR: Q7NP31 Glr0227 protein; PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related.
  
     0.761
Krac_1410
InterPro IPR009959; KEGG: cai:Caci_2666 protein of unknown function DUF1486; PFAM: protein of unknown function DUF1486; SPTR: C7PZC5 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase.
  
     0.760
Krac_4017
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: A9U6M7 Predicted protein; PFAM: SnoaL-like polyketide cyclase.
  
     0.754
Krac_2254
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: A9U6M7 Predicted protein; PFAM: SnoaL-like polyketide cyclase.
  
     0.752
Krac_2384
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: npu:Npun_R2054 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: B5HZI5 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related.
  
     0.748
Krac_3299
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: gvi:glr0227 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: B5WHI3 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase.
  
     0.744
Krac_0079
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: ppr:PBPRB0239 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: Q6LKM5 Putative uncharacterized protein; PFAM: SnoaL-like polyketide cyclase.
  
     0.705
Krac_0831
Protein of unknown function DUF1486; InterPro IPR009959; KEGG: gvi:glr0227 hypothetical protein; PFAM: protein of unknown function DUF1486; SPTR: Q7NP31 Glr0227 protein; PFAM: SnoaL-like polyketide cyclase.
  
     0.694
Krac_0873
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR017894:IPR000560:IPR002560; KEGG: amr:AM1_B0353 transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A8ZLP4 Transposase; PFAM: Transposase.
       0.412
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.