STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EFH88592.1InterPro IPR001041; KEGG: bpy:Bphyt_4562 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B2TD21 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B. (87 aa)    
Predicted Functional Partners:
Krac_7556
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019575:IPR001949; KEGG: swo:Swol_0657 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: B2BSJ8 NADPH-dependent sulfur oxidoreductase B subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit.
  
 0.999
EFH88593.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR007419:IPR000103:IPR017224; KEGG: aca:ACP_3273 pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; SPTR: C1F5T8 Pyridine nucleotide-disulfide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain.
 
  
  0.981
EFH88591.1
FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076:IPR003042; KEGG: hau:Haur_2500 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: A9AZJ4 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase.
 
  
  0.980
EFH88590.1
4-hydroxyproline epimerase; COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: hau:Haur_2499 proline racemase; PFAM: proline racemase; PRIAM: 4-hydroxyproline epimerase; SPTR: A9AZJ3 Proline racemase; PFAM: Proline racemase; Belongs to the proline racemase family.
 
  
  0.970
EFH88594.1
COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220:IPR013785; KEGG: hau:Haur_2503 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: A9AZJ7 Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; Belongs to the DapA family.
 
  
  0.955
Krac_9045
COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336:IPR012335; KEGG: lil:LA0891 NADH dehydrogenase I chain E; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: Q8F7Q3 NADH dehydrogenase I chain E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit.
  
 0.879
Krac_6794
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002869:IPR009014:IPR019752:IPR015941:IPR 002880; KEGG: chl:Chy400_1038 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; SPTR: B9LLV4 Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.820
EFH90138.1
COGs: COG0069 Glutamate synthase domain 2; InterProIPR013785:IPR000583:IPR006982:IPR002932:IPR 002489:IPR017932; KEGG: tro:trd_1105 glutamate synthase [nadph] large chain precursor; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: B9L0N4 Glutamate synthase [nadph] large chain; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II.
     
 0.806
Krac_8409
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterProIPR017900:IPR000759:IPR009051:IPR013027:IPR 001450:IPR017896; KEGG: bja:blr6742 putative glutamate synthase small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q1PYR5 Similar to NAD(P) oxidoreductase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain.
  
 0.798
Krac_9046
NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 0.769
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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