STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH88610.1COGs: COG1437 Adenylate cyclase class 2 (thermophilic); InterPro IPR008172; KEGG: hut:Huta_0514 adenylyl cyclase CyaB; PFAM: adenylate cyclase; SPTR: C7NS94 Adenylyl cyclase CyaB; PFAM: CYTH domain. (216 aa)    
Predicted Functional Partners:
EFH88609.1
Radical SAM domain protein; COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: tpe:Tpen_0755 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: A1RY77 Radical SAM domain protein; PFAM: Radical SAM superfamily.
       0.773
EFH88611.1
Hypothetical protein; KEGG: gyc:GYMC61_2767 urease accessory protein UreD; SPTR: Q2I0B7 Flavonoid 3',5'-hydroxylase (Fragment).
       0.550
EFH88608.1
KEGG: conserved hypothetical protein; SPTR: Q6VZL3 CNPV134 variola B22R-like protein.
       0.518
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.