STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH88613.1Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR005660:IPR000463:IPR016898; KEGG: rrs:RoseRS_1635 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A5UTS4 Polyphosphate:AMP phosphotransferase; PFAM: Polyphosphate kinase 2 (PPK2). (280 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
  
 0.940
Krac_0415
Radical SAM domain protein; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: tro:trd_A0811 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: D1C878 Radical SAM domain protein; PFAM: Radical SAM superfamily; B12 binding domain.
   
    0.802
EFH89322.1
Heme NO binding domain protein; InterPro IPR011644; KEGG: lpn:lpg1056 guanylate cyclase; PFAM: Heme NO binding domain protein; SPTR: Q5ZWM9 Guanylate cyclase; PFAM: Heme NO binding; TIGRFAM: bacteriochlorophyll 4-vinyl reductase.
   
    0.799
Krac_8188
InterPro IPR008162; KEGG: kol:Kole_0517 hypothetical protein; SPTR: C0D512 Putative uncharacterized protein; PFAM: Inorganic pyrophosphatase.
    
 0.696
Krac_8053
COGs: COG0248 Exopolyphosphatase; InterPro IPR003695:IPR007899; KEGG: plt:Plut_2062 exopolyphosphatase, putative; PFAM: Ppx/GppA phosphatase; CHAD domain containing protein; SPTR: C6MKS5 Ppx/GppA phosphatase; PFAM: CHAD domain; Ppx/GppA phosphatase family.
 
  
 0.647
EFH88612.1
Protein of unknown function DUF1684; COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: art:Arth_2554 hypothetical protein; PFAM: protein of unknown function DUF1684; SPTR: A0JY13 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1684).
       0.639
EFH90847.1
COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterProIPR004559:IPR007197:IPR010723:IPR006638:IPR 013785; KEGG: ttr:Tter_1363 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: D1CBV5 Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; B [...]
  
    0.564
Krac_9944
Protein of unknown function DUF55; COGs: COG2947 conserved hypothetical protein; InterPro IPR002740; KEGG: sus:Acid_2578 hypothetical protein; PFAM: protein of unknown function DUF55; SPTR: Q024K9 Putative uncharacterized protein; PFAM: Protein of unknown function DUF55.
   
    0.479
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.