STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH88678.1KEGG: hma:rrnAC2368 hypothetical protein; SPTR: C2BKY7 Transmembrane protein. (132 aa)    
Predicted Functional Partners:
EFH88679.1
Hypothetical protein; InterPro IPR011042; KEGG: GL26260 gene product from transcript GL26260-RA; SPTR: C1WQB0 Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
       0.648
EFH88680.1
DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterPro IPR002941:IPR002052:IPR002295; KEGG: afr:AFE_3192 type III restriction-modification system, Mod subunit; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: B7JB73 Type III restriction-modification system, Mod subunit; PFAM: DNA methylase.
       0.403
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.