STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH88863.1Eco57I restriction endonuclease; InterPro IPR002052:IPR011639:IPR002296; KEGG: hau:Haur_2540 hypothetical protein; PFAM: Eco57I restriction endonuclease; SPTR: A9B069 Putative uncharacterized protein; PFAM: Eco57I restriction endonuclease. (1610 aa)    
Predicted Functional Partners:
EFH88862.1
Helicase domain protein; InterPro IPR001650:IPR014001; KEGG: hau:Haur_2539 helicase domain-containing protein; PFAM: helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: A9B068 Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
     0.947
EFH89036.1
Conserved hypothetical protein; InterPro IPR002052:IPR002296; KEGG: ppd:Ppro_3668 hypothetical protein; SPTR: A0R825 Putative uncharacterized protein; PFAM: Eco57I restriction endonuclease.
  
     0.742
Krac_9276
Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR000330:IPR001650:IPR014021:IPR014001; KEGG: dge:Dgeo_1544 helicase-like protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: C1XMC0 DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
     0.720
Krac_9275
KEGG: gvi:gll2957 hypothetical protein; SPTR: Q7NCM1 Gll2957 protein.
 
     0.708
EFH88861.1
Restriction modification system DNA specificity domain protein; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR000055:IPR002296; KEGG: mfe:Mefer_0543 N-6 DNA methylase; PFAM: restriction modification system DNA specificity domain; N-6 DNA methylase; SPTR: C7P732 N-6 DNA methylase; PFAM: N-6 DNA Methylase; Type I restriction modification DNA specificity domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type.
 
     0.692
EFH89026.1
Conserved hypothetical protein; InterPro IPR002052; KEGG: rrs:RoseRS_2397 hypothetical protein; SPTR: A5UVX1 Putative uncharacterized protein.
 
     0.683
Krac_0814
InterPro IPR003593:IPR011704; KEGG: rrs:RoseRS_1024 ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: A5US30 ATPase associated with various cellular activities, AAA_5; PFAM: AAA domain (dynein-related subfamily).
  
     0.646
Krac_0807
Helicase domain protein; COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021:IPR001650:IPR014001:IPR000330; KEGG: cyn:Cyan7425_5359 helicase domain protein; PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: B4WK96 Helicase conserved C-terminal domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
 
     0.622
EFH88860.1
COGs: COG3586 conserved hypothetical protein; KEGG: mmr:Mmar10_0164 hypothetical protein; SPTR: Q1K1M9 Putative uncharacterized protein.
       0.615
Krac_2983
Transposase IS4 family protein; InterPro IPR012337:IPR002559; KEGG: hau:Haur_5171 transposase IS4 family protein; PFAM: transposase IS4 family protein; SPTR: A7C1C1 IS231-related transposase; PFAM: Transposase DDE domain.
  
     0.600
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.