STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH88891.1Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR005829:IPR011701:IPR016196; KEGG: stp:Strop_0334 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A4X1R9 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (588 aa)    
Predicted Functional Partners:
Krac_4385
Major facilitator superfamily MFS_1; InterPro IPR011701:IPR000215:IPR016196; KEGG: nca:Noca_3099 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C9ZD08 Putative membrane transport protein; PFAM: Major Facilitator Superfamily.
  
  
  0.770
Krac_6995
Major facilitator superfamily MFS_1; InterPro IPR016196:IPR001958:IPR011701; KEGG: nca:Noca_3099 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C9ZD08 Putative membrane transport protein; PFAM: Major Facilitator Superfamily.
  
     0.762
Krac_2490
Major facilitator superfamily MFS_1; InterPro IPR000215:IPR016196:IPR011701:IPR001958; KEGG: nca:Noca_3099 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C9ZD08 Putative membrane transport protein; PFAM: Major Facilitator Superfamily.
  
  
  0.756
Krac_3340
InterPro IPR016196:IPR011701; KEGG: nca:Noca_3099 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: A1SLB6 Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
  
     0.755
Krac_5467
Major facilitator superfamily MFS_1; InterPro IPR016196:IPR011701:IPR001958; KEGG: ami:Amir_4618 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: C1WW71 Major Facilitator Superfamily transporter; PFAM: Major Facilitator Superfamily.
  
     0.742
EFH88919.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR006162:IPR020845:IPR001242:IPR 000873:IPR006163:IPR009081:IPR020459; KEGG: npu:Npun_F2181 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; SPTR: Q9RAH1 NosD; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
     
 0.543
EFH88892.1
KEGG: bgl:bglu_2g12910 amino acid adenylation; SPTR: A3INW7 Amino acid adenylation.
  
 
  0.492
EFH89634.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.464
Krac_6972
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR006162:IPR020845:IPR 001242:IPR000873:IPR006163:IPR001031; KEGG: ava:Ava_1611 amino acid adenylation; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; SPTR: Q3MCQ2 Amino acid adenylation; TIGRFAM: amino acid adenylation domain protein; PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
  
 
 0.412
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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