STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH88910.1GCN5-related N-acetyltransferase; InterPro IPR000182:IPR016181; KEGG: sgr:SGR_2737 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: C9N8S3 GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family. (263 aa)    
Predicted Functional Partners:
EFH88909.1
Response regulator receiver protein; InterPro IPR017894; KEGG: hau:Haur_5033 transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A9B8J9 Transposase IS204/IS1001/IS1096/IS1165 family protein.
       0.651
EFH88908.1
Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: mlo:mll5961 transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: A6C7W7 Transposase; PFAM: Transposase.
       0.530
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.