STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89059.1InterPro IPR004360; KEGG: syx:SynWH7803_2264 glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A3EQD5 Putative glyoxalase/bleomycin resistance protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. (129 aa)    
Predicted Functional Partners:
EFH89060.1
COGs: COG1225 Peroxiredoxin; InterPro IPR000866:IPR017936:IPR012336:IPR012335; KEGG: gur:Gura_0382 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: B4VKQ6 Redoxin superfamily; PFAM: AhpC/TSA family.
       0.634
Krac_7022
Rhodanese domain protein; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001763:IPR001307; KEGG: sti:Sthe_2134 beta-lactamase domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: D1C608 Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
  
  
  0.551
Krac_4416
KEGG: pzu:PHZ_c1913 hypothetical protein; SPTR: C1YS75 Uncharacterized protein, possibly involved in aromatic compounds catabolism; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1.
  
     0.482
EFH89061.1
KEGG: rpc:RPC_3590 hypothetical protein; SPTR: Q6N2F0 Putative uncharacterized protein.
       0.461
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.