STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89120.1Hypothetical protein; KEGG: proteophosphoglycan ppg4; SPTR: Q2VMT1 Phenylalanine ammonia lyase (Fragment); manually curated; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region. (473 aa)    
Predicted Functional Partners:
EFH89460.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: noc:Noc_2902 transposase; PFAM: transposase IS605 OrfB; SPTR: Q3J748 Transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.775
Krac_5234
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: dge:Dgeo_0928 transposase, IS605 OrfB; PFAM: transposase IS605 OrfB; SPTR: Q1IZV4 Transposase, IS605 OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain.
  
     0.775
Krac_9365
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: dge:Dgeo_0928 transposase, IS605 OrfB; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: Q1IZV4 Transposase, IS605 OrfB; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, putative, N-terminal domain.
  
     0.774
EFH89121.1
Resolvase domain protein; COGs: COG2452 site-specific integrase-resolvase; InterPro IPR006119; KEGG: mar:MAE_62920 putative resolvase; PFAM: Resolvase domain; SPTR: B0JLB5 Putative resolvase; PFAM: Resolvase, N terminal domain.
       0.773
Krac_6302
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR002345; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: Q8YWC9 All1684 protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.583
EFH89170.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: Q8YWC9 All1684 protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.580
Krac_7936
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: Q8YWC9 All1684 protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.580
EFH89883.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: Q8YWC9 All1684 protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.575
EFH89663.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; SPTR: Q8YWC9 All1684 protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.566
EFH88600.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: ana:all1684 hypothetical protein; PFAM: transposase IS605 OrfB; SPTR: Q8YWC9 All1684 protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
  
     0.560
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.