STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89298.1Thiocyanate hydrolase; InterPro IPR008990; KEGG: rop:ROP_43460 thiocyanate hydrolase beta subunit; PRIAM: Thiocyanate hydrolase; SPTR: C1BA90 Thiocyanate hydrolase beta subunit; PFAM: Nitrile hydratase beta subunit. (140 aa)    
Predicted Functional Partners:
EFH89297.1
Nitrile hydratase beta subunit; InterPro IPR008990:IPR003168; KEGG: nfa:nfa20760 putative ScnA-like protein; PFAM: nitrile hydratase beta subunit; SPTR: Q5YY19 Putative ScnA homolog; PFAM: Nitrile hydratase beta subunit.
 
  
  0.997
EFH89296.1
Thiocyanate hydrolase; InterPro IPR004232; KEGG: rha:RHA1_ro04428 thiocyanate hydrolase gamma subunit; PFAM: Nitrile hydratase alpha chain; PRIAM: Thiocyanate hydrolase; SPTR: Q0S8C2 Probable thiocyanate hydrolase gamma subunit; PFAM: Nitrile hydratase, alpha chain; TIGRFAM: nitrile hydratase, alpha subunit.
 
  
  0.980
EFH89295.1
Conserved hypothetical protein; InterPro IPR008990; KEGG: rha:RHA1_ro04427 hypothetical protein; SPTR: Q0S8C3 Putative uncharacterized protein; PFAM: Nitrile hydratase beta subunit.
    
 
0.950
Krac_0598
Conserved hypothetical protein; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016162:IPR016161; KEGG: fre:Franean1_3746 hypothetical protein; SPTR: A8L1R9 Putative uncharacterized protein; PFAM: Aldehyde dehydrogenase family.
  
     0.683
Krac_5312
Hypothetical protein; InterPro IPR004378; KEGG: xce:Xcel_1326 hypothetical protein; SPTR: D1BRA2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF385); TIGRFAM: conserved hypothetical protein TIGR00026.
  
     0.679
Krac_0599
KEGG: fre:Franean1_3745 hypothetical protein; SPTR: C9ZEG0 Putative uncharacterized protein; PFAM: AMP-binding enzyme.
  
     0.560
EFH88568.1
Nitrogen-fixing NifU domain protein; InterPro IPR001075; KEGG: rha:RHA1_ro04605 nitrogen fixation protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Q0S7U5 Possible nitrogen fixation protein; PFAM: NifU-like domain.
  
     0.544
EFH88570.1
KEGG: reh:PHG068 hypothetical protein; SPTR: Q7WXQ0 Putative uncharacterized protein.
  
     0.535
EFH88569.1
KEGG: sus:Acid_6558 hypothetical protein; SPTR: B9XAR7 Putative uncharacterized protein.
  
     0.533
EFH89294.1
Hypothetical protein; KEGG: similar to Vac14 homolog.
       0.464
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.