STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89555.1COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR009082:IPR005467:IPR 003018:IPR003661; KEGG: lch:Lcho_1464 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SPTR: B1Y7Z0 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain. (557 aa)    
Predicted Functional Partners:
EFH89125.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR013655:IPR003661:IPR003594:IPR 005467:IPR009082:IPR004358; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGR [...]
 
 
0.999
Krac_4467
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR003594:IPR 009082:IPR001610:IPR003661:IPR004358:IPR013767:IPR013656:I PR013655; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor p [...]
 
 
0.999
Krac_4896
COGs: COG5002 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR005467:IPR000014:IPR 000700:IPR004358:IPR001610:IPR003661:IPR013656:IPR013655; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA [...]
 
 
0.999
Krac_8379
Putative PAS/PAC sensor protein; COGs: COG2202 FOG: PAS/PAC domain; InterProIPR000014:IPR013767:IPR013656:IPR013655:IPR 000700:IPR001610; KEGG: rlg:Rleg_6854 PAS/PAC sensor signal transduction histidine kinase; PFAM: PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; SPTR: B9YP78 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
 
 0.999
Krac_9925
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003594:IPR009082:IPR005467:IPR000014:IPR 000700:IPR001610:IPR003661:IPR004358:IPR013656:IPR013655; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA [...]
 
 
0.999
Krac_0265
COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 009082:IPR004358:IPR005467:IPR000700:IPR013767:IPR013656:I PR013655; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor p [...]
 
 
0.998
Krac_0556
COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR000014:IPR001610:IPR 003661:IPR005467:IPR000700:IPR013767:IPR013655:IPR009082; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B2J8U8 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA g [...]
 
 
0.998
Krac_0671
COGs: COG5002 Signal transduction histidine kinase; InterProIPR004358:IPR003594:IPR000014:IPR001610:IPR 003661:IPR005467:IPR000700:IPR013655:IPR009082; KEGG: mxa:MXAN_6734 response regulator/sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Q1CXM2 Sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like AT [...]
 
 
0.998
Krac_0718
COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467:IPR000014:IPR000700:IPR004358:IPR 003594:IPR009082:IPR001610:IPR003661:IPR013656:IPR013655; KEGG: npu:Npun_R4211 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: C8SDN7 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor [...]
 
 
0.998
EFH88802.1
COGs: COG5002 Signal transduction histidine kinase; InterProIPR013767:IPR013656:IPR013655:IPR003661:IPR 003594:IPR005467:IPR000014:IPR000700:IPR009082:IPR004358:I PR001610; KEGG: gvi:gll3736 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: B7KFL8 Sensor protein; TIGRFAM: PAS sensor prote [...]
 
 
0.998
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.