STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89588.1Serine/threonine protein kinase; InterPro IPR011009:IPR000719:IPR002290; KEGG: fma:FMG_0667 serine/threonine protein kinase; SMART: serine/threonine protein kinase; SPTR: D0LZC0 Serine/threonine protein kinase; PFAM: Protein kinase domain. (403 aa)    
Predicted Functional Partners:
EFH88736.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082:IPR002052; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; [...]
  
 0.778
EFH88743.1
Signal transduction histidine kinase with CheB and CheR activity; COGs: COG1352 Methylase of chemotaxis methyl-accepting protein; InterProIPR000673:IPR000780:IPR013656:IPR003661:IPR 003594:IPR005467:IPR009082; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; CheB methylesterase; MCP methyltransferase CheR-type; PAS fold-4 domain protein; SMART: MCP methyltransferase CheR-type; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Q3M [...]
  
 0.778
Krac_8812
COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635:IPR002290:IPR019734:IPR011990:IPR 011009:IPR000719:IPR013026:IPR017441:IPR017442:IPR001440:I PR013105; KEGG: rrs:RoseRS_1844 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; Tetratricopeptide repeat; SPTR: A5UUD0 Protein kinase; PFAM: Protein kinase domain.
 
   0.752
Krac_0646
COGs: COG0515 Serine/threonine protein kinase; InterProIPR000253:IPR017441:IPR008271:IPR020635:IPR 002290:IPR000719:IPR017442:IPR011009:IPR008984; KEGG: sro:Sros_3456 serine/threonine protein kinase-like protein; PFAM: Serine/threonine-protein kinase-like domain; Forkhead-associated protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; Forkhead-associated protein; SPTR: C4EQL0 Protein kinase domain with FHA domain; PFAM: Protein kinase domain; Zinc finger found in FPG and IleRS; FHA domain.
  
   0.700
EFH89093.1
KEGG: hypothetical protein; SPTR: A0CMY9 Chromosome undetermined scaffold_22, whole genome shotgun sequence.
  
   0.700
Krac_3396
FHA domain containing protein; InterPro IPR000253:IPR008984; KEGG: fra:Francci3_3358 hypothetical protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Q2UZD9 Putative efflux protein; PFAM: FHA domain.
  
   0.700
Krac_9720
COGs: COG0515 Serine/threonine protein kinase; InterProIPR011009:IPR008984:IPR000253:IPR000719:IPR 020635:IPR002290:IPR017441:IPR008271:IPR017442; KEGG: sro:Sros_3456 serine/threonine protein kinase-like protein; PFAM: Serine/threonine-protein kinase-like domain; Forkhead-associated protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, subgroup, catalytic domain; Forkhead-associated protein; SPTR: Q8YMH9 Serine/threonine kinase; PFAM: Protein kinase domain; Prokaryotic dksA/traR C4-type zinc finger; FHA domain.
  
   0.700
Krac_9408
COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789; KEGG: rmr:Rmar_0513 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: D0MEW5 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain.
   
 0.686
Krac_7990
COGs: COG1716 FOG: FHA domain; InterPro IPR008984:IPR000253; KEGG: acp:A2cp1_3479 sigma54 specific transcriptional regulator, Fis family; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: B8J5E7 Sigma54 specific transcriptional regulator, Fis family; PFAM: FHA domain.
 
 
 0.673
Krac_7546
COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290:IPR000719:IPR011009; KEGG: chl:Chy400_4120 serine/threonine protein kinase; SMART: serine/threonine protein kinase; SPTR: B9LGA6 Serine/threonine protein kinase.
 
  0.654
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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