STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89650.1Hypothetical protein; KEGG: gvi:gvip136 DNA topoisomerase I; SPTR: Q7NLU9 DNA topoisomerase. (100 aa)    
Predicted Functional Partners:
EFH89647.1
KEGG: sme:SMc00668 hypothetical protein; SPTR: Q92MC3 Hypothetical transmembrane protein.
       0.773
EFH89648.1
KEGG: sti:Sthe_2356 hypothetical protein; SPTR: D1C7D1 Putative uncharacterized protein.
       0.773
EFH89649.1
Band 7 protein; COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: ttr:Tter_2366 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: D1CHP4 Band 7 protein; PFAM: SPFH domain / Band 7 family.
       0.773
EFH89651.1
COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: sus:Acid_4570 phage shock protein A, PspA; PFAM: PspA/IM30 family protein; SPTR: Q01XT6 Phage shock protein A, PspA; PFAM: PspA/IM30 family.
       0.773
EFH89646.1
KEGG: aba:Acid345_1399 hypothetical protein; SPTR: Q1IRU9 Putative uncharacterized protein.
       0.584
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.