STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH89965.1Hypothetical protein; KEGG: ttr:Tter_2127 ferric reductase domain protein protein transmembrane component domain protein; SPTR: B7DR84 Putative uncharacterized protein. (221 aa)    
Predicted Functional Partners:
EFH89964.1
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.935
Krac_3055
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.721
Krac_2592
Protease-like protein; COGs: COG4934 protease; InterPro IPR000209; KEGG: cai:Caci_1999 protease-like protein; SPTR: C7QFU2 Protease-like protein.
  
     0.550
Krac_7869
InterPro IPR012932; KEGG: ace:Acel_2066 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase; SPTR: A0LWM8 Vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase family.
  
     0.548
Krac_2045
FTR1 family protein; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; KEGG: aca:ACP_1210 FTR1 family protein; SPTR: B7DMS3 Iron permease FTR1; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein.
  
     0.515
Krac_3440
ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.492
Krac_2880
Glucan 1,4-alpha-glucosidase; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterProIPR008928:IPR011013:IPR008960:IPR014756:IPR 015220:IPR011613:IPR019248:IPR014718:IPR012341:IPR015922; KEGG: cai:Caci_7156 glucan 1,4-alpha-glucosidase; PFAM: Glucodextranase N; glycoside hydrolase 15-related; Protein of unknown function DUF2223; PRIAM: Glucan 1,4-alpha-glucosidase; SPTR: C7Q6X2 Glucan 1,4-alpha-glucosidase; PFAM: Glycosyl hydrolases family 15; Glucodextranase, domain N; Domain of unknown function (DUF2223); TIGRFAM: glucan 1,4-alpha-glucosidase.
  
     0.491
EFH90457.1
Peptidase S53 propeptide; COGs: COG4934 protease; InterPro IPR000209:IPR009020:IPR015366; KEGG: sma:SAV_5949 serine protease; PFAM: Peptidase S53 propeptide; SPTR: B5I1Y1 Serine protease; PFAM: Subtilase family; Pro-kumamolisin, activation domain.
  
     0.483
Krac_3441
FMN-binding domain protein; COGs: COG3976 conserved hypothetical protein; InterPro IPR007329; KEGG: mlo:mll6621 hypothetical protein; PFAM: FMN-binding domain protein; SPTR: C5R8S2 FMN-binding domain protein; PFAM: FMN-binding domain.
 
     0.441
Krac_7743
Peptidase S53 propeptide; COGs: COG4934 protease; InterPro IPR000209:IPR009020:IPR015366; KEGG: rsa:RSal33209_3166 pseudomonapepsin precursor; PFAM: Peptidase S53 propeptide; SPTR: A9WUL3 Pseudomonapepsin; PFAM: Pro-kumamolisin, activation domain.
  
     0.433
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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