STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFH90050.1Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: dev:DhcVS_1282 SsrA integrase; PFAM: Resolvase domain; Recombinase; SPTR: D0Y950 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain. (538 aa)    
Predicted Functional Partners:
Krac_8989
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109:IPR006118; KEGG: sti:Sthe_2229 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SPTR: D1C6M6 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.775
Krac_0916
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: eba:ebA1940 site-specific recombinase/DNA invertase; PFAM: Resolvase domain; Recombinase; SPTR: Q5P670 Site-specific recombinase/DNA invertase; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.774
Krac_3984
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: eba:ebA1940 site-specific recombinase/DNA invertase; PFAM: Resolvase domain; Recombinase; SPTR: Q5P670 Site-specific recombinase/DNA invertase; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.774
Krac_4493
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: eba:ebA1940 site-specific recombinase/DNA invertase; PFAM: Resolvase domain; Recombinase; SPTR: Q5P670 Site-specific recombinase/DNA invertase; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.774
Krac_9478
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: eba:ebA1940 site-specific recombinase/DNA invertase; PFAM: Resolvase domain; Recombinase; SPTR: Q5P670 Site-specific recombinase/DNA invertase; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.774
Krac_9994
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR009061:IPR011109; KEGG: sti:Sthe_2229 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SPTR: D1C6M6 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain; TIGRFAM: DNA binding domain, excisionase family.
  
     0.774
Krac_1690
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006118:IPR006119:IPR011109; KEGG: nha:Nham_4607 resolvase-like protein; PFAM: Resolvase domain; Recombinase; SPTR: Q1QF24 Resolvase-like; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.770
Krac_4053
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR009057:IPR006120:IPR006118; KEGG: ses:SARI_00048 hypothetical protein; PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; SPTR: A9MF49 Putative uncharacterized protein; PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase.
  
     0.596
EFH90048.1
KEGG: sti:Sthe_1559 hypothetical protein; SPTR: D1C427 Putative uncharacterized protein; PFAM: Baseplate J-like protein.
       0.492
Krac_7449
Resolvase domain protein; COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119:IPR011109; KEGG: amt:Amet_4291 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: B2JY29 Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain.
  
     0.406
Your Current Organism:
Ktedonobacter racemifer
NCBI taxonomy Id: 485913
Other names: K. racemifer DSM 44963, Ktedonobacter racemifer DSM 44963, Ktedonobacter racemifer str. DSM 44963, Ktedonobacter racemifer strain DSM 44963
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